SANTIA: a Matlab-based open-source toolbox for artifact detection and removal from extracellular neuronal signals

  • Marcos Fabietti
  • , Mufti Mahmud*
  • , Ahmad Lotfi
  • , M. Shamim Kaiser
  • , Alberto Averna
  • , David J. Guggenmos
  • , Randolph J. Nudo
  • , Michela Chiappalone
  • , Jianhui Chen
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

17 Scopus citations

Abstract

Neuronal signals generally represent activation of the neuronal networks and give insights into brain functionalities. They are considered as fingerprints of actions and their processing across different structures of the brain. These recordings generate a large volume of data that are susceptible to noise and artifacts. Therefore, the review of these data to ensure high quality by automatically detecting and removing the artifacts is imperative. Toward this aim, this work proposes a custom-developed automatic artifact removal toolbox named, SANTIA (SigMate Advanced: a Novel Tool for Identification of Artifacts in Neuronal Signals). Developed in Matlab, SANTIA is an open-source toolbox that applies neural network-based machine learning techniques to label and train models to detect artifacts from the invasive neuronal signals known as local field potentials.

Original languageEnglish
Article number14
JournalBrain Informatics
Volume8
Issue number1
DOIs
StatePublished - Dec 2021
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2021, The Author(s).

Keywords

  • Artifacts
  • Local field potential
  • Machine learning
  • Neural networks
  • Neuronal signals

ASJC Scopus subject areas

  • Neurology
  • Computer Science Applications
  • Cognitive Neuroscience

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