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Robust Glioblastoma Segmentation Across Multi-modal MRI: A Study on BraTS 2025 Challenge, Task 5 (Sub-Saharan Africa)

  • Abbas Mohamed Rezk
  • , Abdulkhalek Al-Fakih
  • , Abdullah Shazly
  • , Kanghyun Ryu*
  • , Mohammed A. Al-masni*
  • *Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

Abstract

Accurate segmentation of glioblastoma’s distinct regions is vital for treatment planning but remains challenging, especially in datasets from low-resource settings. This paper presents our submission to the BraTS-Lighthouse 2025 Challenge (Task 5: Sub-Saharan Africa Adult Glioma Segmentation), which addresses heterogeneous multi-institutional mpMRI scans from the sub-Saharan African population. We extend the U-Net architecture with three dedicated decoders to segment non-overlapping tumor regions: surrounding non-enhancing FLAIR hyperintensity (SNFH), non-enhancing tumor core (NETC), and enhancing tumor (ET). Each decoder specializes in its region, supported by an attention mechanism that emphasizes the most relevant MRI sequences—for example, T2 and FLAIR for SNFH, T1 and T1ce for NETC and ET—enhancing region-specific feature learning. Evaluated on the BraTS-Africa 2025 validation set, our approach outperforms state-of-the-art baselines, including optimized and tuned U-Net achieving an average lesion-wise dice of 0.846, demonstrating robust and precise tumor delineation in this underserved and diverse population.

Original languageEnglish
Title of host publicationSegmentation, Classification, and Synthesis for Brain Tumors and Traumatic Brain Injuries - MICCAI 2025 Challenges
Subtitle of host publicationBraTS-Lighthouse 2025 and AIMS-TBI 2025, Held in Conjunction with MICCAI 2025, Proceedings
EditorsSpyridon Bakas, Emily Dennis, Mehdi Astaraki, Ujjwal Baid, Gian Marco Conte, Martha Foltyn-Dumitru, Zhifan Jiang, Marius George Linguraru, Dominic Labella, Marie-Christin Metz, Udunna Anazodo, Maria Correia de Verdier, Florian Kofler, Hongwei Bran Li, Nazanin Maleki
PublisherSpringer Science and Business Media Deutschland GmbH
Pages318-327
Number of pages10
ISBN (Print)9783032163646
DOIs
StatePublished - 2026
Externally publishedYes
EventBrain TumorS Lighthouse Cluster of Challenges, and the Automated Identification of Moderate-Severe Traumatic Brain Injury Lesions Challenge, BraTS 2025 and AIMS-TBI 2025, held in Conjunction International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025 - Daejeon, Korea, Republic of
Duration: 23 Sep 2025 → 27 Sep 2025

Publication series

NameLecture Notes in Computer Science
Volume16376 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

ConferenceBrain TumorS Lighthouse Cluster of Challenges, and the Automated Identification of Moderate-Severe Traumatic Brain Injury Lesions Challenge, BraTS 2025 and AIMS-TBI 2025, held in Conjunction International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2025
Country/TerritoryKorea, Republic of
CityDaejeon
Period23/09/25 → 27/09/25

Bibliographical note

Publisher Copyright:
© The Author(s), under exclusive license to Springer Nature Switzerland AG 2026.

Keywords

  • Attention mechanism
  • Brain Tumor Segmentation
  • Multiple pathways

ASJC Scopus subject areas

  • Theoretical Computer Science
  • General Computer Science

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