QCD-MLP: A Machine-Learning Framework for Predicting Transformation Products of Organic Micropollutants in Radical-Mediated Systems

Dilhani Senevinanda, Dhimas Dwinandha, Mohamed Elsamadony, Jibao Liu, Mikito Fujinami, Manabu Fujii*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Understanding the transformation products (TPs) of organic micropollutants in radical-mediated reactions is essential for improving water treatment and environmental risk assessment. This study introduces the quantum-chemical-descriptor-based machine-learning prediction (QCD-MLP) model to predict TPs in hydroxyl (OH) and chlorine (Cl) radical-mediated systems. QCD-MLP, trained on the publicly available elementary radical-reaction database (RMechDB), leverages quantum-chemical descriptors derived from dispersion-corrected density functional theory (DFT-D) to capture atomic-level reactivity, achieving AUC values of 93% forOH and 89% for Clsystems across 345 and 150 reactions, respectively. Global-level SHapley Additive exPlanations (SHAP) analysis identified the nuclear magnetic shielding constant (NMR) as the dominant factor inOH-mediated reactions, while steric effects governed Clreactivity. Local-level SHAP interpretation within molecular groups highlighted Fukui values as key predictors in alcohols and aromatics, showing the model’s ability to differentiate radical interactions based on molecular properties. Benchmarking against experimental and computational data confirmed the model’s precision in predicting major TPs, including meta-hydroxylated dimethyl phthalate and hydroxylated phenol derivatives. While QCD-MLP excels at radical addition and H-atom abstraction, it currently excludes downstream reactions such as ring-opening or oxidative fragmentation. Unlike conventional models, QCD-MLP offers a scalable and interpretable framework for TPs identification in natural and engineered processes.

Original languageEnglish
Pages (from-to)5881-5892
Number of pages12
JournalACS ES and T Water
Volume5
Issue number10
DOIs
StatePublished - 10 Oct 2025

Bibliographical note

Publisher Copyright:
© 2025 American Chemical Society

Keywords

  • chlorine radicals
  • emerging organic contaminants
  • hydroxyl radicals
  • machine learning
  • quantum-chemical calculations
  • transformation products

ASJC Scopus subject areas

  • Chemistry (miscellaneous)
  • Chemical Engineering (miscellaneous)
  • Environmental Chemistry
  • Water Science and Technology

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