Experimental and theoretical studies of pyrazole-4-carbaldehyde derivatives by X-ray crystallography, DFT, molecular docking, and molecular dynamics simulation

Fahad Abdulaziz, Asif Jamal, Md Serajul Haque Faizi, Abdul Malik P. Peedikakkal, Afzal Hussain, Idris Juma Al-Busaidi, Necmi Dege, Khalaf M. Alenezi, Ashanul Haque*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Nitrogen-containing heterocycles play a crucial role in drug design and discovery. Pyrazole derivatives have garnered attention due to their unique and intriguing features. This study investigates the structure and properties of two pyrazole-4-carbaldehyde derivatives (3 and 4). We report the single crystal structure of one of the intermediate compounds, 1-(1-(4-bromophenyl)ethylidene)-2-(2-chlorophenyl)hydrazine (2), and a final compound, 1-(2-chlorophenyl)-3-phenyl-1H-pyrazole-4-carbaldehyde (3). We analysed the non-covalent interactions within the crystal using Hirshfeld surface analysis and 2D fingerprint plots. We also used density functional theory (DFT) at the B3LYP/6–311G(d,p) level to optimise the structures and understand electronic properties, transitions and vibrational frequencies. To predict the anti-inflammatory potentials and selectivity of 3 and 4, molecular docking and molecular dynamics (MD) simulation studies against COX1 (PDB ID: 1EQG) and COX2 (PDB ID: 1CX2) receptors were conducted. Overall, this study sheds light on the structural, chemical, and biochemical features of two pyrazole-4-carbaldehyde derivatives.

Original languageEnglish
Article number139796
JournalJournal of Molecular Structure
Volume1321
DOIs
StatePublished - 5 Feb 2025

Bibliographical note

Publisher Copyright:
© 2024 Elsevier B.V.

Keywords

  • Characterisation
  • DFT
  • Hirschfeld surface analysis
  • MD simulation
  • Molecular docking
  • Pyrazole-4-carbaldehyde
  • X-ray

ASJC Scopus subject areas

  • Analytical Chemistry
  • Spectroscopy
  • Organic Chemistry
  • Inorganic Chemistry

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